- Hierarchy searching algorithm based on layer-projection patterns (Harris, Mihalas, Hirokawa, Whitesell, Choi, Bernard et al, 2019. Nature)
- Synchronizability in the mouse whole-brain network model (Choi & Mihalas, 2019. PLoS Computational Biology)
- Rate-based model capturing dynamics of a simplified V4-PFC neuronal network (Fyall, El-Shamayleh, Choi, Shea-Brown, Pasupathy, 2017. eLife)
- Multi-compartmental AII amacrine cell model (Choi, Zhang, …, Riecke, 2014. Journal of Neurophysiology)